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Getting Started

16
  • Quick Start Guide
  • Papers Desktop vs Web App
  • Revert to Papers Classic
  • Papers Pro FAQ
  • What shortcuts are presently supported
  • How to Import Content into Papers Reference Manager
  • Migrating from Mendeley to Papers
  • Importing Your Library From Endnote
  • Import From Another Reference Manager
  • How to Import Content into Your Papers Library via CSV
  • How to Add Metadata-Only References to Your Papers Library
  • Import by Use of .ris File From External Database – With PDFs and Without PDFs
  • How to Import Records from ClinicalTrials.gov into Papers
  • Article Matching (Manual and With Helper)
  • Metadata Resolving & Incomplete Records
  • How to Import Pubmed .Nbib Files Into Papers

Installation and Setup

5
  • How to toggle dark mode in the Papers desktop app
  • Papers System Requirements: What You Need to Get Started
  • Installing the Papers Desktop Application
  • How To Set Up My Institutional Proxy in Papers?
  • How to get Help/Support

Papers AI Assistant

4
  • Introduction to AI Assistant
  • Chat with PDF
  • AI Assisted Query Builder (Papers Pro)
  • Chat with your Library with AI Assistant (Papers Pro)

Browser Extension

8
  • Save to Library Feature
  • What Browser Versions Support the Papers Web App?
  • How to Import References from Web Pages and Search Results
  • How to Install the Papers Browser Extension
  • What Do the Browser Extensions Buttons Mean?
  • How to deploy the Papers Chrome extension via GPO
  • About the Extension Sidebar
  • Browser Extension on Google Scholar

Search & Discover

9
  • Full text search
  • Advanced Searching (in library)
  • Query Builder
  • Find Related Articles Using the Papers Reader
  • Introduction to Papers Query Builder
  • What are Papers Recommendations?
  • Introduction to Papers Search
  • Save searching options in Papers
  • Importing Grey Literature Into Papers

Read & Annotate

12
  • PDF Reader Overview
  • Annotation Options in the PDF Reader
  • How to View Supplementary Files in Reference Entries
  • How to Enable Dark Mode for the Reader?
  • How can I view figures in the Reader?
  • How Can I Navigate Directly From an Inline Citation to an Article/Reference?
  • How to Export PDF Notes
  • How to View an Article’s Full Reference List in the Reader
  • How to View Supplementary Information in Reader
  • Print PDF with my highlights attached
  • Enable Dark Mode for the Reader
  • How To Download the PDF Version of an Article From the Reader

Organize

13
  • Downloading PDFs/Offline Access
  • Citekey Management
  • File Management
  • How to Organize Articles in Papers: A Step-by-Step Guide
  • Papers Library View: Customizing Your Library
  • Introduction to Smart Lists
  • Introduction to Custom Fields
  • Watch Folders
  • Duplicate Merging During Import
  • Citing organizations as authors
  • Authors with multi-text names
  • CSV Import/Export
  • An Article Was Mislabelled as a Supplement (Or Vice Versa)

Collaboration

4
  • Collection not accessible
  • Introduction to Public Lists
  • What Are the Permissions of a Shared Library?
  • How Do I Create a Shared Library?

Library & Device Sync

3
  • How to Enable Additional Sources in the Papers PDF Reader
  • Syncing Your Library Offline
  • How to connect Papers with Overleaf

Mobile

2
  • Double-page PDF view in Papers mobile app
  • Papers mobile app overview

SmartCite

11
  • Vancouver citation style renamed
  • How to use footnotes with SmartCite?
  • Converting an EndNote formatted document into SmartCite
  • Introduction to SmartCite for Citekeys
  • How do I add a custom citation style to the SmartCite Add-in?
  • Converting SmartCite Citations into EndNote Friendly Format
  • Update/Change Citation Style in SmartCite
  • Customizing Inline Citations
  • Using section bibliographies in SmartCite
  • Citing organizations as authors in Papers
  • Using hyperlinks in SmartCite bibliography

Accounts & Billing

4
  • Papers Refund Policy
  • What is ReadCube?
  • Upgrade from Papers to ReadCube
  • Forgot password
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Papers Desktop vs Web App

A common question we get is what are the primary differences between the web and desktop app – the quick answer is that most of our features are the same across both, so it really is more down to preference than functionality. Having said that, there are some specific features, listed below, that are unique to the desktop application:

  • Tab Restoration – Remember open PDFs when closing the app
  • Default Citation Style – Select from over 10000 styles to quickly copy and paste references from
  • File Management – Keep files organized on your local disk with predefined naming conventions
  • Citekey Management – Generate citekeys for all references using predefined naming conventions
  • Watch Folders – Add a local file folder to be watched by the desktop app so that it can automatically upload new PDFs into your library from within that folder
  • Offline Access– Interact with your library without internet and sync up when you regain internet access
  • EndNote Import – Advanced EndNote import allows you to grab PDFs & references from Endnote quickly
  • Zotero Import – Advanced Zotero import allows you to grab PDFs & references from Zotero quickly
  • Mendeley Import  – Advanced Mendeley import allows you to grab PDFs & references from Mendeley quickly
  • SmartCite for Citekeys – Turn papers with citekeys into a formatted bibliography through the Papers desktop application
Updated on January 22, 2026

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