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Getting Started

12
  • Import From Another Reference Manager
  • How to Import Records from ClinicalTrials.gov into Papers
  • How to Add Metadata-Only References to Your Papers Library
  • Revert to Papers Classic
  • Import by Use of .ris File From External Database – With PDFs and Without PDFs
  • Papers Pro FAQ
  • Papers Desktop vs Web App
  • Quick Start Guide
  • How to Import Content into Papers Reference Manager
  • Importing Your Library From Endnote [Papers Desktop]
  • Article Matching (Manual and With Helper)
  • How to Import Pubmed .Nbib Files Into Papers

Installation and Setup

4
  • Papers System Requirements: What You Need to Get Started
  • Installing the Papers Desktop Application
  • How To Set Up My Institutional Proxy in Papers?
  • How to get Help/Support

Papers AI Assistant

4
  • Introduction to AI Assistant
  • Papers AI Chat with PDF
  • AI Assisted Query Builder (Papers Pro)
  • Chat with your Library with AI Assistant (Papers Pro)

Browser Extension

11
  • What Browser Versions Support the Papers Web App?
  • The Browser Extension on Non Supported Websites
  • How to Import References from Web Pages and Search Results
  • How to Upgrade Your Chrome Extension to Manifest Version 3 (MV3)
  • How to Install the Papers Browser Extension
  • What Do the Browser Extensions Buttons Mean?
  • How to deploy the Papers Chrome extension via GPO
  • About the Extension Sidebar
  • Papers Browser Extension
  • Browser Extension on Google Scholar
  • How to Enable Additional Sources in the Papers Browser Extension

Search & Discover

8
  • Advanced Searching (in library)
  • Query Builder
  • Find Related Articles Using the Papers Reader
  • Introduction to Papers Query Builder
  • What are Papers Recommendations?
  • Introduction to Papers Search
  • Save searching options in Papers
  • Importing Grey Literature Into Papers

Read & Annotate

14
  • How to View Supplementary Files in Reference Entries
  • How to Enable Dark Mode for the Reader?
  • How can I view figures in the Papers Reader?
  • How Can I Navigate Directly From an Inline Citation to an Article/Reference?
  • The Papers Enhanced PDF Reader (ePDF)
  • How to Export PDF Notes
  • How to View an Article’s Full Reference List in Papers Web Reader
  • How to View Supplementary Information in Papers Reader
  • How to View Supplementary Files in Reference Entries
  • Print PDF with my highlights attached
  • Papers Enhanced PDF Reader (ePDF)
  • Enable Dark Mode for the Reader
  • Annotation Options in the Papers PDF Reader
  • How To Download the PDF Version of an Article From the Papers Reader

Organize

9
  • Authors with multi-text names
  • Introduction to Smart Lists
  • How Do I Organize My Articles in Papers?
  • An Article Was Mislabelled as a Supplement (Or Vice Versa)
  • How to export files from the Papers web application
  • How to Organize Articles in Papers: A Step-by-Step Guide
  • CSV Import/Export
  • How to Export Your Papers Library With and Without PDFs
  • Duplicate Merging During Import

Collaboration

2
  • What Are the Permissions of a Shared Library?
  • How Do I Create a Shared Library?

Library & Device Sync

2
  • Syncing Your Library Offline
  • How to connect Papers with Overleaf

Mobile

2
  • Double-page PDF view in Papers mobile app
  • Papers mobile app overview

SmartCite

4
  • How do I add a custom citation style to the SmartCite Add-in?
  • Converting SmartCite Citations into EndNote Friendly Format
  • Update/Change Citation Style in SmartCite
  • Customizing Inline Citations

Accounts & Billing

2
  • What is ReadCube?
  • Upgrade from Papers to ReadCube
  • Home
  • Help Center
  • Getting Started

Import From Another Reference Manager

Easily import your library from another reference manager into Papers. To begin, launch the Papers web application on the browser of your choice and select select the ” + ” symbol on the upper right hand menu: 

From there, you’ll be able to import from several different file types including .pdf, .bib. and .ris:

You can also select where you’d like this content to import, be it to your personal Papers library, or, to any Shared Libraries you may be apart of: 



Once you hit “next”, your content will import to the location of your choosing. You’ll see the process on the bottom left of your screen:


As always, please contact us at Papers Support

***

Section 2

(the following instructions are for the classic version of Papers)

Easily import your library from another reference manager into Papers. To begin, launch the Papers desktop application for Mac or Windows and select “Add” and “Import Files”

From there, you’ll see options to import directly from EndNote, Zotero, and Mendeley:

In this menu you will also see import options for other library file types such as .bib and .ris


Please follow the guide below to import from additional reference managers using the file format above:

RefWorks

Select the references you would like to export. Select “Export” from the “References” menu. Select BibTeX as Export Format and click on “Export References”. Take the .bib export file and drag it into Papers import it by clicking the “Add+” button in the top bar of the library window and browse to select the BibTeX file. 

Bookends

First, go to “Attachments” in the left menu of Bookends. Select any attachment in the list and right-click and select “Show attachment in Finder”. This will open the folder where all of your PDFs are stored. Select all of the physical PDFs from that folder and drag those into the Papers app.  Next, go to “Hits” in the left menu and select the references.  Go to File > Export References (Hits) in the top menu bar and select export type as XML. In the Papers desktop app, click on “Add+” in the top bar of the library window and browse to select the XML file.

Paperpile

Go to Settings > Export to export your complete library to RIS or BibTeX. Drag the metadata file into your Papers library window or use the “Add+” button at top of the library to add select the file from your desktop. If you also store PDFs in Paperpile, you will want to download those PDFs locally or use the Google Drive desktop file manager to view them on your desktop. Select and drag the local PDFs into the app to match the PDFs with the metadata.

SciWheel

Open SciWheel in your browser. Select all the citations in your library by clicking on “All References” in the sidebar, checking the box under “All” to select citations, then selecting “All References” from the drop-down menu. Once selected, click the icon two buttons over that looks like a box with an arrow pointing inside of it. Then select “Export as…” from the drop-down menu. Next, name your file and select the RIS format from the dropdown menu. Select “Download File”. The file will automatically go to your “Downloads” folder. You can drag the RIS file into the Papers library view to import or use the “Add+” button at the top to select the downloaded file from your “Downloads” folder.

Please note:

  • Your folder structure from your old reference manager will not carry over. That data is not included in export files. To keep your library structure, create a new list in Papers by clicking on the cog icon next to “My Papers” and selecting the “Create list” option. Then export the contents of specific folders from your original reference manager using the steps above.

If you have any issues please feel free to contact us at [email protected]

Updated on April 23, 2025

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How to Import Records from ClinicalTrials.gov into Papers
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